Bridges SM, McCarthy FM, Burgess SC (2009) Value from billions of archosaur base-pairs. BMC Genomics, in press.

Burgess SC (2007) Proteomics and Gene Ontology. Poult. Sci., in press.

Buza TJ, Kumar R, McCarthy FM, Burgess SC (2009) Facilitating Functional Annotation of Chicken Microarray Data. BMC Bioinformatics, in press.

Kang Y, Prewitt ML, Diehl SV (2009) Proteomics for biodeterioration of wood (Pinus taeda): Challenging analysis by 2D-PAGE and MALDI-TOF-MS/MS. Intl. Biodeterioration Biodegrad., in press.

Kirker GT, Diehl S.V., Prewitt ML, Schultz TP, Diehl WJ (2009) Fungal community analysis of preservative treated SYP (Pinus taeda) using terminal restriction fragment length polymorphism (T-RFLP) analysis. Holzforschung, in press.

Kumar S, Buza JJ, Burgess SC (2009) Genotype-Dependent Tumor Regression in Marek's Disease Mediated at the Level of Tumor Immunity. Cancer Microenv., in press.

McCarthy FM, Mahony TJ, Parcells MS, Burgess SC (2009) Understanding animal viruses using the Gene Ontology. Trends Microbiol., in press.

Booth NJ, Bilodeau-Bourgeois AL (2009) Proteomic analysis of head kidney tissue from high and low susceptibility families of channel catfish following challenge with Edwardsiella ictaluri. Fish Shellfish Immunol. 26: 193-196.

Bunge J, Chouvarine P, Peterson DG (2009) CotQuest: improved algorithm and software for nonlinear regression analysis of DNA reassociation kinetics data. Anal. Biochem. 388: 322-330.

Burt DW, Carre W, Fell M, Law AS, Antin PB, Weber J, Schmidt CJ, Burgess SC, McCarthy FM (2009) The Chicken Gene Nomenclature Committee Report. BMC Genomics 10 (Suppl 2): S5.

Donaldson JR, Nanduri B, Burgess SC, Lawrence ML (2009) Comparative proteomic analysis of Listeria monocytogenes strains F2365 and EGD. Appl. Environ. Microbiol. 75: 366-373.

Dumpala PR, Lawrence ML, Karsi A (2009) Proteome analysis of Edwardsiella ictaluri. Proteomics 9: 1353-1363.

Elibol-Flemming B, Waldbieser GC, Wolters WR, Boyle CR, Hanson LA (2009) Expression analysis of selected immune-relevant genes in channel catfish during Edwardsiella ictaluri infection. J. Aquat. Anim. Health 21: 23-35.

Feugang JM, Kaya A, Page GP, Chen L, Mehta T, Hirani K, Nazareth L, Topper E, Gibbs R, Memili E (2009) Two-stage genome-wide association study identifies integrin beta 5 as having potential role in bull fertility. BMC Genomics 10: 176.

Kakani A, Li G, Peng Z (2009) Role of AUX1 in the control of organ identity during in vitro organogenesis and in mediating tissue specific auxin and cytokinin interaction in Arabidopsis. Planta 229: 645-657.

Karsi A, Gulsoy N, Corb E, Dumpala PR, Lawrence ML (2009) High-throughput bioluminescence-based mutant screening strategy for identification of bacterial virulence genes. Appl. Environ. Microbiol. 75: 2166-2175.

Kunec D, van HS, Burgess SC, Hanson LA (2009) A Gateway recombination herpesvirus cloning system with negative selection that produces vectorless progeny. J. Virol. Meth. 155: 82-86.

Kunec D, Nanduri B, Burgess SC (2009) Experimental annotation of channel catfish virus by probabilistic proteogenomic mapping. Proteomics 9: 2634-2647.

Lee SR, Nanduri B, Pharr GT, Stokes JV, Pinchuk LM (2009) Bovine viral diarrhea virus infection affects the expression of proteins related to professional antigen presentation in bovine monocytes. Biochim. Biophys. Acta. 1794: 14-22.

Majji S, Thodima V, Arnizaut A, Deng Y, May W, Sittman D, Waldbieser GC, Hanson L, Cuchens MA, Bengten E, Chinchar VG (2009) Expression profiles of cloned channel catfish (Ictalurus punctatus) lymphoid cell lines and mixed lymphocyte cultures. Dev. Comparative Immunol. 33: 224-234.

McCarthy FM, Cooksey AM, Burgess SC (2009) Sequential detergent extraction prior to mass spectrometry analysis. Methods Mol. Biol. 528: 110-118.

Milev-Milovanovic I, Majji S, Thodima V, Deng Y, Hanson L, Arnizaut A, Waldbieser G, Chinchar VG (2009) Identification and expression analyses of poly [I:C]-stimulated genes in channel catfish (Ictalurus punctatus). Fish Shellfish Immunol. 26: 811-820.

Morse AM, Peterson DG, Islam-Faridi MN, Smith KE, Magbanua Z, Garcia SA, Kubisiak TL, Amerson HV, Carlson JE, Nelson CD, Davis JM (2009) Evolution of genome size and complexity in Pinus. PLoS One 4: e4332.

Nanduri B, Hanson LA, Burgess SC, Lawrence ML (2009) The transcriptional response of Pasteurella multocida to three classes of antibiotics. BMC Genomics 10 (Suppl 2): S4.

Paterson AH, Bowers JE, Bruggmann R, Dubchak I, Grimwood J, Gundlach H, Haberer G, Hellsten U, Mitros T, Poliakov A, Schmutz J, Spannagl M, Tang H, Wang X, Wicker T, Bharti AK, Chapman J, Feltus FA, Gowik U, Grigoriev IV, Lyons E, Maher CA, Martis M, Narechania A, Otillar RP, Penning BW, Salamov AA, Wang Y, Zhang L, Carpita NC, Freeling M, Gingle AR, Hash CT, Keller B, Klein P, Kresovich S, McCann MC, Ming R, Peterson DG, Mehboob uR, Ware D, Westhoff P, Mayer KF, Messing J, Rokhsar DS (2009) The Sorghum bicolor genome and the diversification of grasses. Nature 457: 551-556.

Shan X, Ray DA, Bunge JA, Peterson DG (2009) A bacterial artificial chromosome library for the Australian saltwater crocodile (Crocodylus porosus) and its utilization in gene isolation and genome characterization. BMC Genomics 10 (Suppl 2): S9.

Thanthrige-Don N, Abdul-Careem MF, Shack LA, Burgess SC, Sharif S (2009) Analyses of the spleen proteome of chickens infected with Marek's disease virus. Virology 390: 356-367.

Buza JJ, Burgess SC (2008) Different signaling pathways expressed by chicken naive CD4(+) T cells, CD4(+) lymphocytes activated with staphylococcal enterotoxin B, and those malignantly transformed by Marek's disease virus. J. Proteome Res. 7: 2380-2387.

Buza TJ, McCarthy FM, Wang N, Bridges SM, Burgess SC (2008) Gene Ontology annotation quality analysis in model eukaryotes. Nucleic Acids Res. 36: e12.

Chouvarine P, Saha S, Peterson DG (2008) An automated, high-throughput sequence read classification pipeline for preliminary genome characterization. Anal. Biochem. 373: 78-87.

Cooksey AM, Corzo A, Koter MD, Burgess SC (2008) Quantitative serum proteomics of tryptophan nutrition using bi-directional heavy oxygen labeling with a RuBisCO internal standard. Open Proteomics J. 1: 27-39.

Dail MB, Shack LA, Chambers JE, Burgess SC (2008) Global liver proteomics of rats exposed for 5 days to phenobarbital identifies changes associated with cancer and with CYP metabolism. Toxicol. Sci. 106: 556-569.

Dandass YS, Burgess SC, Lawrence M, Bridges SM (2008) Accelerating string set matching in FPGA hardware for bioinformatics research. BMC Bioinformatics 9: 197.

Das PC, Streit TM, Cao Y, Rose RL, Cherrington N, Ross MK, Wallace AD, Hodgson E (2008) Pyrethroids: cytotoxicity and induction of CYP isoforms in human hepatocytes. Drug Metabol. Drug Interact. 23: 211-236.

Elder SH, Shim JW, Borazjani A, Robertson HM, Smith KE, Warnock JN (2008) Influence of hydrostatic and distortional stress on chondroinduction. Biorheology 45: 479-486.

Felfoldi B, Pharr GT, Pinchuk LM, Cooksey AM, Thaxton JP (2008) Preliminary protein profile analysis of the late embryonic B-cell stages in the chicken bursa of Fabricius. Intl. J. Poult. Sci. 7: 125-128.

Holly C, Ervin G, Jackson CR, Diehl SV, Kirker GT (2008) Effect of an invasive grass on ambient rates of decompostion and microbial community structure: A search for causality. Biol. Invasions, DOI 10.1007/s10530-008-9354-5.

Hsu CY, An C, Saha S, Ma DP, Jenkins JN, Scheffler B, Stelly DM (2008) Molecular and SNP characterization of two genomic specific transcription factor genes GhMyb8 and GhMyb10 in cotton species. Euphytica 159: 259-273.

Karsi A, Howe K, Kirkpatrick TB, Wills R, Bailey RH, Lawrence ML (2008) Development of bioluminescent Salmonella strains for use in food safety. BMC Microbiol. 8: 10.

Khijwania SK, Kim CK, Singh JP, Burgess SC (2008) Optimized fiber optic bioprobe with high spectral contrast exploiting laser-induced fluorescence for malignancy diagnosis. Appl. Optics 47: 6615-6624.

Kunec D, Hanson LA, van HS, Nieuwenhuizen IF, Burgess SC (2008) An overlapping bacterial artificial chromosome system that generates vectorless progeny for channel catfish herpesvirus. J. Virol. 82: 3872-3881.

Lee SM, Brown RL (2008) Phylogenetic Relationships of Holarctic Teleiodini (Lepidoptera: Gelechiidae) Based on Analysis of Morphological and Molecular Data. Systematic Entomol. 33: 595-612.

Li G, Nallamilli BR, Tan F, Peng Z (2008) Removal of high-abundance proteins for nuclear subproteome studies in rice (Oryza sativa) endosperm. Electrophoresis 29: 604-617.

Menzel TO, Cross DC, Chen J, Caprio MA, Nebeker TE (2008) A survey of red imported fire ant (Hymenoptera: Formicidae) species and social forms across four counties in east-central Mississippi. Midsouth Entomol. 1: 3-10.

Metzler SA, Pregonero CA, Butcher JT, Burgess SC, Warnock JN (2008) Cyclic strain regulates pro-inflammatory protein expression in porcine aortic valve endothelial cells. J Heart Valve Dis. 17: 571-577.

Minerick AR (2008) The rapidly growing field of micro and nanotechnology to measure living cells. Aiche J. 54: 2230-2237.

Mujahid S, Pechan T, Wang C (2008) Protein expression by Listeria monocytogenes grown on a RTE-meat matrix. Int. J Food Microbiol. 128: 203-211.

Nanduri B, Shah P, Ramkumar M, Allen EB, Swiatlo E, Burgess SC, Lawrence ML (2008) Quantitative analysis of Streptococcus pneumoniae TIGR4 response to in vitro iron restriction by 2-D LC ESI MS/MS. Proteomics 8: 2104-2114.

Parcells MS, Burgess SC (2008) Immunological aspects of Marek’s disease virus (MDV)-induced lymphoma progression: Immune Suppression and Modulation. Edited by: Kaiser HE. Springer, Dordrecht, The Netherlands, pp. 169-191.

Paul D, Bridges S, Burgess SC, Dandass Y, Lawrence ML (2008) Genome sequence of the chemolithoautotrophic bacterium Oligotropha carboxidovorans OM5T. J. Bacteriol. 190: 5531-5532.

Pechanova O, Stone WD, Monroe W, Nebeker TE, Klepzig KD, Yuceer C (2008) Global and comparative protein profiles of the pronotum of the southern pine beetle, Dendroctonus frontalis. Insect Mol. Biol. 17: 261-277.

Peddinti D, Nanduri B, Kaya A, Feugang JM, Burgess SC, Memili E (2008) Comprehensive proteomic analysis of bovine spermatozoa of varying fertility rates and identification of biomarkers associated with fertility. BMC Syst. Biol. 2: 19.

Pinchuk GV, Lee SR, Nanduri B, Honsinger KL, Stokes JV, Pinchuk LM (2008) Bovine viral diarrhea viruses differentially alter the expression of the protein kinases and related proteins affecting the development of infection and anti-viral mechanisms in bovine monocytes. Biochim. Biophys. Acta 1784: 1234-1247.

Prewitt ML, Diehl SV, McElroy TC, Diehl WJ (2008) Comparison of General Fungal and Basidiomycete Specific ITS primers for Identification of Wood Decay Fungi. Forest Prod. J. 58: 66-71.

Saha S, Bridges S, Magbanua ZV, Peterson DG (2008) Computational approaches and tools used in identification of dispersed repetitive DNA sequences. Tropical Plant Biol. 1: 85-96.

Saha S, Bridges S, Magbanua Z, Peterson DG (2008) Discovering relationships among dispersed repeats using spatial association rule mining. BMC Bioinformatics 9: O4.

Saha S, Bridges S, Magbanua ZV, Peterson DG (2008) Empirical comparison of ab initio repeat finding programs.  Nucleic Acids Res. 36: 2284-2294.

Scott VL, Burgess SC, Shack LA, Lockett NN, Coats KS (2008) Expression of CD134 and CXCR4 mRNA in term placentas from FIV-infected and control cats. Vet. Immunol. Immunopathol. 123: 90-96.

Shack LA, Buza JJ, Burgess SC (2008) The neoplastically transformed (CD30hi) Marek's disease lymphoma cell phenotype most closely resembles T-regulatory cells. Cancer Immunol. Immunother. 57: 1253-1262.

Shim JW, Wise DA, Elder SH (2008) Effect of Cytoskeletal Disruption on Mechanotransduction of Hydrostatic Pressure by C3H10T1/2 Murine Fibroblasts. Open Orthop. J. 2: 155-162.

Srivastava SK, Daggolu PR, Burgess SC, Minerick AR (2008) Dielectrophoretic characterization of erythrocytes: positive ABO blood types.  Electrophoresis 29: 5033-5046.

Streit TM, Borazjani A, Lentz SE, Wierdl M, Potter PM, Gwaltney SR, Ross MK (2008) Evaluation of the 'side door' in carboxylesterase-mediated catalysis and inhibition. Biol. Chem. 389: 149-162.

Bridges SM, Magee GB, Wang N, Williams WP, Burgess SC, Nanduri B (2007) ProtQuant: a tool for the label-free quantification of MudPIT proteomics data. BMC Bioinformatics 8 (Suppl 7): S24.

Buza JJ, Burgess SC (2007) Modeling the proteome of a Marek's disease transformed cell line: a natural animal model for CD30 overexpressing lymphomas. Proteomics 7: 1316-1326.

Buza TJ, McCarthy FM, Burgess SC (2007) Experimental-confirmation and functional-annotation of predicted proteins in the chicken genome. BMC Genomics 8: 425.

Chan D, Bridges SM, Burgess SC (2007) An Ensemble Method for Identifying Robust Features for Biomarker Identification. In: Computational Methods of Feature Selection. Edited by: Liu H, Motoda H. Taylor & Francis, Boca Raton, USA, pp. 377-389.

Chaudhary A, Pechan T, Willett KL (2007) Differential protein expression of peroxiredoxin I and II by benzo(a)pyrene and quercetin treatment in 22Rv1 and PrEC prostate cell lines. Toxicol. Appl. Pharmacol. 220: 197-210.

Cogburn LA, Porter TE, Duclos MJ, Simon J, Burgess SC, Zhu JJ, Cheng HH, Dodgson JB, Burnside J (2007) Functional genomics of the chicken--a model organism. Poult. Sci. 86: 2059-2094.

Crow JA, Borazjani A, Potter PM, Ross MK (2007) Hydrolysis of pyrethroids by human and rat tissues: examination of intestinal, liver and serum carboxylesterases. Toxicol. Appl. Pharmacol. 221: 1-12.

Dail MB, Burgess SC, Meek EC, Wagner J, Baravik J, Chambers JE (2007) Spatial distribution of CYP2B1/2 messenger RNA within the rat liver acinus following exposure to the inducers phenobarbital and dieldrin. Toxicol. Sci. 99: 35-42.

Dennis JH, Fan HY, Reynolds SM, Yuan G, Meldrim JC, Richter DJ, Peterson DG, Rando OJ, Noble WS, Kingston RE (2007) Independent and complementary methods for large-scale structural analysis of mammalian chromatin. Genome Res. 17: 928-939.

Godin SJ, Crow JA, Scollon EJ, Hughes MF, DeVito MJ, Ross MK (2007) Identification of rat and human cytochrome p450 isoforms and a rat serum esterase that metabolize the pyrethroid insecticides deltamethrin and esfenvalerate. Drug Metab. Dispos. 35: 1664-1671.

Karsi A, Lawrence ML (2007) Broad host range fluorescence and bioluminescence expression vectors for Gram-negative bacteria. Plasmid 57: 286-295.

McCarthy FM, Bridges SM, Burgess SC (2007) GOing from functional genomics to biological significance. Cytogenet. Genome Res. 117: 278-287.

McCarthy FM, Bridges SM, Wang N, Magee GB, Williams WP, Luthe DS, Burgess SC (2007) AgBase: a unified resource for functional analysis in agriculture. Nucleic Acids Res. 35: D599-D603.

Memili E, Peddinti D, Shack LA, Nanduri B, McCarthy F, Sagirkaya H, Burgess SC (2007) Bovine germinal vesicle oocyte and cumulus cell proteomics. Reproduction 133: 1107-1120.

Mujahid S, Pechan T, Wang C (2007) Improved solubilization of surface proteins from Listeria monocytogenes for 2-DE. Electrophoresis 28: 3998-4007.

Plomion C, Chagné D, Pot D, Kumar S, Wilcox PL, Burdon RD, Prat D, Peterson DG, Paiva J, Chaumeil P, Vendramin GG, Sebastiani F, Nelson CD, Echt CS, Savolainen O, Kubisiak TL, Cervera MT, de María N, Islam-Faridi MN (2007) The Pines. In: Genome Mapping and Molecular Breeding in Plants, Vol. 7 - Forest Trees. Edited by: Kole CR. Springer, Heidelberg, Berlin, New York, Tokyo, pp. 29-78.

Sanders WS, Bridges SM, McCarthy FM, Nanduri B, Burgess SC (2007) Prediction of peptides observable by mass spectrometry applied at the experimental set level. BMC Bioinformatics 8 (Suppl 7): S23.

Tan F, Li G, Chitteti BR, Peng Z (2007) Proteome and phosphoproteome analysis of chromatin associated proteins in rice (Oryza sativa). Proteomics 7: 4511-4527.

van den Berg BH, Harris T, McCarthy FM, Lamont SJ, Burgess SC (2007) Non-electrophoretic differential detergent fractionation proteomics using frozen whole organs. Rapid Commun. Mass Spectrom. 21: 3905-3909.

Betancourt AM, Burgess SC, Carr RL (2006) Effect of developmental exposure to chlorpyrifos on the expression of neurotrophin growth factors and cell-specific markers in neonatal rat brain. Toxicol. Sci. 92: 500-506.

Bunge J, Epstein SS, Peterson DG (2006) Comment on "Computational improvements reveal great bacterial diversity and high metal toxicity in soil." Science 313: 918.

Burgess SC, Cummings TS, Steegh AMT, McCarthy FM, Hanson LA, Sullivan DC, Nolan RL (2006) Distinguishing closely-related streptogramin-resistant Enterococcus faecium: SNPs in one specific 16S-23S rRNA intergenic region. J. Anim. Vet. Adv. 5: 855-862.

Collier SD, Pharr GT, Branton SL, Evans JD, Leigh SA, Felfoldi B (2006) Initial proteomics analysis of differentially expressed proteins from ts-11 and F strain detected by Western blotting. Intl. J. Poult. Sci. 5: 330-336.

Corzo A, Kidd MT, Dozier WA, III, Shack LA, Burgess SC (2006) Protein expression of pectoralis major muscle in chickens in response to dietary methionine status. Br. J Nutr. 95: 703-708.

Hsu CY, Liu Y, Luthe DS, Yuceer C (2006) Poplar FT2 shortens the juvenile phase and promotes seasonal flowering. Plant Cell 18: 1846-1861.

Karsi A, Menanteau-Ledouble S, Lawrence ML (2006) Development of bioluminescent Edwardsiella ictaluri for noninvasive disease monitoring. FEMS Microbiol. Lett. 260: 216-223.

Lee SR, Pharr GT, Cooksey AM, McCarthy FM, Boyd BL, Pinchuk LM (2006) Differential detergent fractionation for non-electrophoretic bovine peripheral blood monocyte proteomics reveals proteins involved in professional antigen presentation. Dev. Comparative Immunol. 30: 1070-1083.

McCarthy FM, Cooksey AM, Wang N, Bridges SM, Pharr GT, Burgess SC (2006) Modeling a whole organ using proteomics: the avian bursa of Fabricius. Proteomics 6: 2759-2771.

McCarthy FM, Wang N, Magee GB, Nanduri B, Lawrence ML, Camon EB, Barrell DG, Hill DP, Dolan ME, Williams WP, Luthe DS, Bridges SM, Burgess SC (2006) AgBase: a functional genomics resource for agriculture. BMC Genomics 7: 229.

Mohan S, Ma PW, Pechan T, Bassford ER, Williams WP, Luthe DS (2006) Degradation of the S. frugiperda peritrophic matrix by an inducible maize cysteine protease.  J. Insect Physiol. 52: 21-28.

Nanduri B, Lawrence ML, Boyle CR, Ramkumar M, Burgess SC (2006) Effects of subminimum inhibitory concentrations of antibiotics on the Pasteurella multocida proteome. J. Proteome Res. 5: 572-580.

Parker HM, McDaniel CD (2006) The immediate impact of semen diluent and rate of dilution on the sperm quality index, ATP utilization, gas exchange, and ionic balance of broiler breeder sperm. Poult. Sci. 85: 106-116.

Pharr GT, Branton SL, Cooksey AM, Hanson LA, Burgess SC, Bottoms CC, Collier SD (2006) The Recognition of a vlhA Protein from the F-Strain of Mycoplasma gallisepticum with Monoclonal Antibody 6F10. Intl. J. Poult. Sci. 5: 789-795.

Ross MK, Borazjani A, Edwards CC, Potter PM (2006) Hydrolytic metabolism of pyrethroids by human and other mammalian carboxylesterases.  Biochem. Pharmacol. 71: 657-669.

Shim JW, Elder SH (2006) Influence of cyclic hydrostatic pressure on fibrocartilaginous metaplasia of achilles tendon fibroblasts. Biomech. Model. Mechanobiol. 5: 247-252.

Warnock JN, Burgess SC, Shack A, Yoganathan AP (2006) Differential immediate-early gene responses to elevated pressure in porcine aortic valve interstitial cells. J Heart Valve Dis. 15: 34-41.

Corzo A, Kidd MT, Koter MD, Burgess SC (2005) Assessment of dietary amino acid scarcity on growth and blood plasma proteome status of broiler chickens. Poult. Sci. 84: 419-425.

Lamoureux D, Peterson DG, Li W, Fellers JP, Gill BS (2005) The efficacy of Cot-based gene enrichment in wheat (Triticum aestivum L.). Genome 48: 1120-1126.

McCarthy FM, Burgess SC, van den Berg BH, Koter MD, Pharr GT (2005) Differential detergent fractionation for non-electrophoretic eukaryote cell proteomics. J. Proteome Res. 4: 316-324.

Nanduri B, Lawrence ML, Vanguri S, Burgess SC (2005) Proteomic analysis using an unfinished bacterial genome: the effects of subminimum inhibitory concentrations of antibiotics on Mannheimia haemolytica virulence factor expression. Proteomics 5: 4852-4863.

Peterson DG (2005) Reduced representation strategies and their application to plant genomes. In: The Handbook of Genome Mapping: Genetic and Physical Mapping. Edited by: Meksem K, Kahl G. WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim, pp. 307-335.

Scott TR, Messersmith AR, McCrary WJ, Herlong JL, Burgess SC (2005) Hematopoietic prostaglandin D2 synthase in the chicken Harderian gland. Vet. Immunol. Immunopathol. 108: 295-306.

van den Berg BH, Pingen JH, Harris T, McCarthy FM, Zhou H, Lamont S, Holmes WE, Burgess SC (2005) Differential Detergent Fractionation and frozen whole organ proteomics. J. Amer. Soc. Mass Spectrom. 16: 69s.

Weaver CC, Burgess SC, Nelson PD, Wilkinson M, Ryan PL, Nail CA, Kelly-Quagliana KA, May ML, Reeves RK, Boyle CR, Coats KS (2005) Placental immunopathology and pregnancy failure in the FIV-infected cat. Placenta 26: 138-147.

Wicker T, Robertson JS, Schulze SR, Feltus FA, Magrini V, Morrison JA, Mardis ER, Wilson RK, Peterson DG, Paterson AH, Ivarie R (2005) The repetitive landscape of the chicken genome. Genome Res. 15: 126-136.

Burgess SC, Young JR, Baaten BJ, Hunt L, Ross LN, Parcells MS, Kumar PM, Tregaskes CA, Lee LF, Davison TF (2004) Marek's disease is a natural model for lymphomas overexpressing Hodgkin's disease antigen (CD30). Proc. Natl. Acad. Sci. U. S. A 101: 13879-13884.

Burgess SC (2004) Proteomics in the chicken: tools for understanding immune responses to avian diseases. Poult. Sci. 83: 552-573.

Corzo A, Kidd MT, Pharr GT, Burgess SC (2004) Initial mapping of the chicken blood plasma proteome. Intl. J. Poultry Sci. 3: 157-162.

Corzo A, Kidd MT, Burgess SC (2004) Whole-plasma MALDI-TOF proteomics for identification of biomarkers of nutritional status in the chicken. J. Anim. Vet. Adv. 3: 522-526.

Hale LL, Pharr GT, Burgess SC, Corzo A, Kidd MT (2004) Isoleucine needs of thirty- to forty-day-old female chickens: immunity. Poult. Sci. 83: 1979-1985.

Pechan T, Ma PW, Luthe DS (2004) Heterologous expression of maize (Zea mays L.) Mir1 cysteine proteinase in eukaryotic and prokaryotic expression systems. Protein Expr. Purif. 34: 134-141.

Paterson AH, Bowers JE, Chapman BA, Peterson DG, Rong J, Wicker TM (2004) Comparative genome analysis of monocots and dicots, toward characterization of angiosperm diversity. Curr. Opin. Biotechnol. 15: 120-125.

Paterson AH, Bowers JE, Peterson DG, Estill JC, Chapman BA (2003) Structure and evolution of cereal genomes. Curr. Opin. Genet. Dev. 13: 644-650.

Yuceer C, Kubiske ME, Harkess RL, Land SB, Jr. (2003) Effects of induction treatments on flowering in Populus deltoides. Tree Physiol. 23: 489-495.

Pechan T, Cohen A, Williams WP, Luthe DS (2002) Insect feeding mobilizes a unique plant defense protease that disrupts the peritrophic matrix of caterpillars. Proc. Natl. Acad. Sci. U. S. A. 99: 13319-13323.

Peterson DG, Wessler SR, Paterson AH (2002) Efficient capture of unique sequences from eukaryotic genomes. Trends Genet. 18: 547-550.